When the transposon is used as a selectable marker. the cotransduction frequency depends on the selection order of the markers. In this study. we adopted a mathematical approach to explain this phenomenon. At first, the formation of transducing particles were considered in five different configurations. Then the probability functions indicating the possibilities for a marker to be fixed were mathematically formulated on the basis of probability density concept. After actual values and useful assumptions were integrated into the Formula. resulting frequencies from theoretical calculations were compared with actual data. Such analysis let us conclude that the asymmetry in the frequency arose from the lack of homology required for homologous recombination due to the transposon insertion and from the suppression of recombination around the region where the transposon is inserted.