The coupled vibration of the deck house and stern structure, which was experienced on a 12,900 TDW Ro/Ro ship, has been studied. It was a large-scale vibration problem where the structure resonates with the propeller excitation at the first blade passing frequency. After discussing the structural characteristics of the ship, the vibration characteristics measured ducting the sea-trial are presented and compared with the analysis results which are based on a 3 dimensional finite element(FE) model. The FE model is also used to verify various reinforcement options and to predict their effectiveness. A substantial reduction or the vibration was confirmed during the sea-trial after installing a few selected reinforcement. The forced vibration response, which is computed using the FE model, is compared with the measured data. The change of the vibration characteristics according to loading conditions is also studied.