One of the main problems in evaluating complex objects, such as an ill-defined system, is how to treat ambiguous aspect of the evaluation. Due to the Complexity and ambiguity of the objects, many types of evaluation attributes should be identified based on the rational dsision. One of these attributes is an analytical hierarchy process (AHP). the weight of evaluation attribtes in AHP however comes from the probability measure based on the additivity. Therefore, it is notapplicable to the objects which have the property of non-additivity. In the previous studies by other researchers they intriduced the Hierarchical Fuzzy Integral method or mergd AHP and fuzzy measure for the analysis of the overlaps among the evaluation objects. But, they need more anlyses in terms of transformation of the probability measure into fuzzy measure which fits for the additivity and overlapping coefficient which affects to the fuzzy measure. Considering these matters, this paper deals that, ⅰ) clarifying the relation between the fuzzy and probability measure adopted in AHP, ii) calculating directly the family of fuzzy measure from the overlapping coefficient and probability measure. A simple algorithm for the calculation of fuzzy measures and set family of those from the above results is also proposed. Finally, the effectiveness of the algorithm developed by applying this to the problems for estimation of safety in ship berthing and for evaluation of ports in competition is verified. This implied that the new algoritnm gives better description of the system evaluation.