In order to explain the connection between ginseng rust spot and soil ecological conditions, the bed soils and ginseng roots were sampled at different microrelief units and the reducing substances of the bed soils and iron forms of the ginseng root epi dermises were determined. The results showed that the occurrence of the rust spot was connected with the ecological conditions of the soils and the metabolism of the plant which was caused by the excessive $Fe^{2+}$ in the soil solution. Ginseng rust spot was the enrichment of iron which was mainly composed of organic complex irons. Including active ferrous active ferric and non active ferric forms and they were transformed into each other following the change of soil moisture and temperature regimes. According to the regularity of growth and decline of reducing substances in soil and rust index of ginseng roots as well as the difference of adaptability to excessive $Fe^{2+}$ in soil among different year-old seeding, a new comprehensive measure based on the connection of ameliorating soil and improving cultivation system was recommended to prevent the occurrence of ginseng rust spot.