The effects of the interaction between the flow and temperature field and a boundary layer due to a variety of the height of a vortex generator are experimentally investigated. The test facility consists of a boundary-layer wind tunnel with the vortex generator protruding from the bottom surface. In order to control the strength of the longitudinal vortices, the angle of attack and the spacing distance of the vortex generator are 20 degree and 40 mm, respectively. The height of the vortex generator (H) is 15 mm, 20 mm and 30 mm and the cord length of it is 50 mm. Three-component mean velocity measurements are made using a 5-hole probe system and the surface temperature distribution is measured by the hue capturing method using thermochromatic liquid crystals. By using the method mentioned above, the following conclusions are obtained from the present experiment. The boundary layer is thinned in the downwash region where the strong downflow and the lateral outflow of the boundary layer fluid occur and thickened in the upwash re,3ion where the longitudinal vortex sweeps low momentum fluid away from the bottom surface. In case that the height of the vortex generator increases, the averaged circulation and the maximum vorticity of the vortex pair decrease. The contours of the non-dimensional temperature show the similar trends fur all the cases (H=15 mm, 20 mm and 30 mm). The peak augmentation of the distribution of the local non-dimensional temperature occurs in the downwash region near the point of minimum boundary-layer thickness.