In the past, ports have been mainly developed in natural harbors but nowadays ports are built wherever they can be economically justified. Therefore, construction of breakwater in area that establishment of structure is disadvantageous is risen according to the change of conditions to the location for ports. In case of building gravity breakwater in such point, need that plane shapes of more reasonable section permitting wave overtopping is necessary. One of the earliest methods for solving unsteady incompressible flow including free surfaces is the MAC(Marker And Cell) method by Harlow and Welch (1965). Recently. VOF(Volume Of Fluid) method to improve several drawbacks of MAC method is suggested by Hirt and Nichols(1981) and utilized extensively in fields of hydrodynamics. Wave overtopping phenomenon is simulated including wave breaking for permeable breakwater by numerical analysis and investigated features of wave overtopping behind structure using VOF method.