A biped robot should be designed to be an effective mechanical structure and have smaller hardware system if it is to be a stand-alone structure. This paper shows the design methodology of a biped robot controller using FPGA(Field Programmable Gate Array). A hardware system consists of DSP(Digital Signal Processor) as the main CPU, and FPGA as the motor controller. By using FPGA, more flexible hardware system has been achieved, and more compact and simple controller has been designed.