Insertion of cannulae into vessels may disturb the blood flow doing non-physiological load and stress on blood cells such that ADP may increase and result in hemolysis. Authors used the computational method to simulate the 3-dimensional blood flow inside of the cannula using numerical method. We limited the research to within the drainage cannulae with side holes inserted through the human vein. In this paper, 9 different cannulae with side holes categorized by the number of side holes of 4, 12, and 20, and also categorized by the array type of side holes of staggered array, in-line array, and alternative in-line array were studied and compared to the cannula with no side holes by using CFD analysis. We evaluated the flow rate, the wall shear stress, and the shear rate and compared them with one another to estimate the effect of the side holes. The flow rate is not proportional to the number of the side holes. However, larger number of side holes can reduce the mean shear rate. Both the number and the array type of side holes play an important role on the fluid dynamics of the blood flow in cannulae.