In view of the lack of efficient coordination of interdependent task in the collaborative design system, the mechanisms for temporal and resource coordination problems are established based on Petri Nets, respectively. Both of the mechanisms are encapsulated and implemented in the coordination component so as to increase the flexibility and acceptability of the system. We model the CSCW system based on Petri Nets for simulation, analysis and optimization. A case study on the overhead traveling crane is given to demonstrate and validate our theory.