In this study, the reduced system for the dynamic analysis is proposed and the selection criterion of the primary degrees of freedom is presented considering the relation between natural frequency and external loading frequency. A well-constructed reduced system can assure the accurate representation of the dynamic behavior under arbitrary dynamic loads. For selecting the primary degrees of freedom of the reduced system, we employ the robust two-level condensation scheme of which the reliability has been proven through previous study. In the numerical examples, the reliability of the dynamic analysis based on the reduced system is demonstrated through comparing with those of global system.