The purpose of this study is to develop the jellyfish separator system(JSS) for reducing fishery damage by the increase of jellyfish in the sea area of Korea in summer. First of all, to find the optimum structure of a JSS, six types of JSS in trawl fishery were designed and manufactured, the underwater shape of JSS and the separating process by JSS were observed in the circulating water channel(CWC). And the field experiments were carried out in July and September 2004 in the southern sea of Korea. For the moving path of the jellyfish model in the CWC, in case that the model was larger than the mesh size of the separator net, it was guided toward the lower part of the separator net by the guiding net and discharged through the outlet. In case that the model was smaller than the mesh size of the separator net, some models which passed through the upper part of the guiding net were smaller than the mesh size of the guiding net and discharged through the outlet and most of the model which passed through the lower part of the guiding net moved to the codend passing through the separator net. According to the field experiment result, the optimum tilt angle of separator net was inferred $20^{circ}$ that the discharge rate of jellyfish was higher than the other tilt angle of separator net and the optimum structure of JSS was inferred GS type(consists of guiding net and separator net) that the discharge rate of jellyfish was higher than S type(consists of separator net). It was demamded to carry out more study for the countermeasure to reduce loss of fish.