The paper addresses modeling and analysis of the part load performance of a hybrid fuel cell system integrating a polymer electrolyte membrane fuel cell(PEMFC) and a gas turbine(GT). The system is a pressurized one where the working pressure of the PEMFC is higher than the ambient pressure. In addition to the two major components, the system also includes auxiliary parts such as a steam reformer, a humidifier, and afterburner and so on. Based on design analysis, component off-design models are incorporated in the analysis program and part load operation is simulated. The mode for the part load operation of the PEMFC/GT hybrid system is a variable rotational speed operation. The operating characteristics and variations in the system efficiency and component performance parameters at part load are analyzed.