The ouput power of wave energy system in buoy is determined according to the inner diameter of oscillating water column and flow resistance. The increase of adhered shellfish inside the water column leads to decrease the inner diameter of wave energy converter. Influx loss of seawater reduces the efficiency of output power in the wave generation system. In this paper, the test result of AFS characteristic is described for preventing the deposition with shellfish and etc. The current of anode is controlled by buck converter, and the control algorithm developed for AFS in buoy. The experimental results is shown excellent preventing capapbility of AFS in buoy.