Water quality data for 10 years (2000~2009) from about 826 reservoirs that are operated as a agricultural water quality survey network were analyzed in order to seek water quality management plan based on physical and chemical characteristics of agricultural reservoirs. The 95% reservoirs that exceed agricultural water quality standard of Chl-a (35mg/ $m^3$) had effective water depth shallower than 5m. The reason was that the reservoirs had more inflows of nutrient salts from the watershed, bigger surface water area of weak structure to algae occurrence. As the reservoirs of effective water depth shallower than 5m cover 49% of benefited area for irrigation, it is critical for agricultural water quality management of the reservoirs. The water quality of reservoir with shallower than 5m effective water depth was worse than reservoir with deeper than 5m effective water depth. Therefore, it is desirable that effective water depth of reservoirs make more than 5m for water quality management by building the bank higher and dredging the bottom of reservoirs.