Projected increases in atmospheric $CO_2$ concentration ([$CO_2$]) and temperature ($T_a$) have the potential to alter in rice growth and yield. However, little is known about whether $T_a$ warming with elevated [$CO_2$] modify plant architecture. To better understand the vertical profiles of leaf area index (LAI) and the flag leaf morphology of rice grown under elevated $T_a$ and [$CO_2$], we conducted a temperature gradient field chamber (TGC) experiment at Gwangju, Korea. Rice (Oryza sativa L. cv. Dongjin1ho) was grown at two [$CO_2$] [386 (ambient) vs 592 ppmV (elevated)] and three $T_a$ regimes [26.8 ($approx$ambient), 28.1 and $29.8^{circ}C$] in six independent field TGCs. While elevated $T_a$ did not alter total LAI, elevated [$CO_2$] tended to reduce (c. 6.6%) the LAI. At a given canopy layer, the LAI was affected neither by elevated [$CO_2$] nor by elevated $T_a$, allocating the largest LAI in the middle part of the canopy. However, the fraction of LAI distributed in a higher and in a lower layer was strongly affected by elevated $T_a$; on average, the LAI distributed in the 75-90 cm (and 45-60 cm) layer of total LAI was 9.4% (and 35.0%), 18.8% (25.9%) and 18.6% (29.2%) in ambient $T_a$, $1.3^{circ}C$ and $3.0^{circ}C$ above ambient $T_a$, respectively. Most of the parameters related to flag leaf morphology was negated with elevated [$CO_2$]; there were about 12%, 5%, 7.5%, 15% and 21% decreases in length (L), width (W), L:W ratio, area and mass of the flag leaf, respectively, at elevated [$CO_2$]. However, the negative effect of elevated [$CO_2$] was offset to some extent by $T_a$ warming. All modifications observed were directly or indirectly associated with either stimulated leaf expansion or crop phenology under $T_a$ warming with elevated [$CO_2$]. We conclude that plant architecture and flag leaf morphology of rice can be modified both by $T_a$ warming and elevated [$CO_2$] via altering crop phenology and the extent of leaf expansion.