Reliability analysis of pile type quaywalls were done by using response surface method. Pier structures have implicit form of limit state function since they are flexible in motion, which is different from gravity type quaywalls. To solve a reliability analysis problem with implicit limit state function, response surface method was applied. Reliability indices of structure under seismic load were found for pier structures Then, they were compared with those found by simulation method. In numerical analysis, both the inclined type and vertical type were analyzed.