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GoBean: a Java GUI application for visual exploration of GO term enrichments
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  • GoBean: a Java GUI application for visual exploration of GO term enrichments
  • GoBean: a Java GUI application for visual exploration of GO term enrichments
저자명
Lee. Sang-Hyuk,Cha. Ji-Young,Kim. Hyeon-Jin,Yu. Ung-Sik
간행물명
BMB reports
권/호정보
2012년|45권 2호|pp.120-125 (6 pages)
발행정보
생화학분자생물학회
파일정보
정기간행물|ENG|
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기타
이 논문은 한국과학기술정보연구원과 논문 연계를 통해 무료로 제공되는 원문입니다.
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기타언어초록

We have developed a biologist-friendly, Java GUI application (GoBean) for GO term enrichment analysis. It was designed to be a comprehensive and flexible GUI tool for GO term enrichment analysis, combining the merits of other programs and incorporating extensive graphic exploration of enrichment results. An intuitive user interface with multiple panels allows for extensive visual scrutiny of analysis results. The program includes many essential and useful features, such as enrichment analysis algorithms, multiple test correction methods, and versatile filtering of enriched GO terms for more focused analyses. A unique graphic interface reflecting the GO tree structure was devised to facilitate comparisons of multiple GO analysis results, which can provide valuable insights for biological interpretation. Additional features to enhance user convenience include built in ID conversion, evidence code-based gene-GO association filtering, set operations of gene lists and enriched GO terms, and user -provided data files. It is available at http://neon.gachon.ac.kr/GoBean/.