The COMS, which is a multi-purposed satellite that provide the oceanic measurement data and meterological image data, is operating since 2010. Ka-band satellite communication transponder in COMS gets the MSM function that can provide the required multi-beam and transmits the multi-mode signal with high data rate. The phase noise of COMS communication transponder can be increased because of several local oscillators for MSM function and the utilization of Ka-band frequency. The phase noise affects the performance for the multi-mode and high rate data based- transmission method, it is not possible to recover the transmission data in system with the high system phase noise. In this paper, the phase noise of COMS was measured and the effects of the measured phase noise are analysed and evaluated in the viewpoint of the noise bandwidth of transmission system, Also the transmission performances for multi-mode and high rate data are evaluated in the presence of COMS phase noise.