In this paper, we report that the differences between RF power levels can be improved in wavelength division multiplexing - radio over fiber (WDM-RoF) system by using a photonic crystal fiber. In a WDM-RoF system, each WDM channel experiences different received RF power level fluctuation in remote node (RN) because of wavelength-dependent dispersion. Since each WDM channel experiences different power fluctuation, the RF power fluctuation acts as a design constraint in viewpoint of network design. We designed a photonic crystal fiber to improve the effect of wavelength- dependent dispersion on RF power fluctuation. Also, we analyzed the wavelength-dependent difference of inter-channel RF power fluctuations.