Tsunami disaster, which ruined Japan Fukushima nuclear power plant sites in 2011 March, has raised not only the perception of that Tsunami and/or large scale flooding possibly surpass the design baselines for industry facilities and plants, but also the necessity to establish recovery system against flooding. This study suggests the framework for flooding and drainage system in compliance with flooding and drainage concept to define and identify requirements, functions, and components of the system with traceable relations. The framework with combination to CMMI engineering process is the base of corresponding high level system design.