In the recent years, cyber attacks by malicious codes called malware has become a social problem. With the explosive appearance and increase of new malware, innumerable disasters caused by metaphoric malware using the existing malicious codes have been reported. To secure more effective detection of malicious codes, in other words, to make a more accurate judgment as to whether suspicious files are malicious or not, this study introduces the malware analysis system, which is based on a profiling technique using the Finite Automata. This new analysis system enables realtime automatic detection of malware with its optimized partial execution method. In this paper, the functions used within a file are expressed by finite automata to find their correlation, and a realtime malware analysis system enabling us to give an immediate judgment as to whether a file is contaminated by malware is suggested.