This study is to present an improvement of physical security system operation by survey on the install and operation of physical security system of 90 facilities. The level of CCTV operation is higher than Access Control system and Intrusion Detection System. But the level of maintenance and management of physical security system is low. The rate of install of X-ray Inspection device show the concern on material detection, although the rate is low. The level of install and operation for the Integration of physical security system is low, so integration of security personnel and security system is necessary for the effective operation. For reinforcement of access control management, security gate and preparing of some obstacles are required with RFID.