This study evaluated the pattern of groundwater fluctuation in cyrstalline rock using time series and factor analyses. From the results, groundwater level for the 18 wells was classified into 4 types reflecting the hydrogeological properties and rainfall event. Type 1 (DB1-5, DB1-6, DB2-2, KB-10, KB-13) was significantly influenced by groundwater flow through water-conducting features, whereas type 2 (DB1-3, DB1-7, KB-1~KB-3, KB-7, KB-11, KB-14, KB-15) was affected by minor fracture network as well as rainfall event. Type 3 (DB1-1, DB1-2) was mainly influenced by surface infiltration of rainfall event. Type 4 (DB1-8, KB-9) was reflected by the irregular variation of groundwater level caused by anisotropy and heterogeneity of crystalline rock.