The cross flow turbine attracts more and more attention for its relatively wide operating range and simple structure. In this study, a novel type of micro cross flow turbine is developed for application to a step in an irrigational channel. The head of the turbine is only H=4.3m and the turbine inlet channel is open ducted type, which has barely been studied. The efficiency of the turbine with inlet open duct channel is relatively low. Therefore, a guide nozzle on the turbine inlet is attached to improve the performance of the turbine. The guide nozzle shapes are investigated to find the best shape for the turbine. The guide nozzle plays an important role on directing flow at the runner entry, and it also decreases the negative torque loss by reducing the pressure difference in Region 1. There is 12.5% of efficiency improvement by attaching a well shaped guide nozzle on the turbine inlet.